The most common and most likely answer to this crossword clue is the 3 plus 3 plus 3 letter word AYE AYE SIR
I've seen this crossword clue in The Guardian
A
Y
E
A
Y
E
S
I
R
Buddy explains!
The straight part
We know that "I obey" is the straight/definition part of the clue. The straight part is often a synonym or definition, in this case i obey = aye aye sir.The cryptic/wordplay part
In cryptic crossword there's often an wordplay/cryptic part as well.This part involves a more complex hint, such as an anagram, homophone, hidden word, etc.
Sadly, We don't have an explanation for this specific crossword clue yet.