The most common and most likely answer to this crossword clue is the 9 letter word REANNEXES
R
E
A
N
N
E
X
E
S
Buddy explains!

The straight part
We know that "again takes over" is the straight/definition part of the clue. The straight part is often a synonym or definition, in this case again takes over = reannexes.The cryptic/wordplay part
In cryptic crossword there's often an wordplay/cryptic part as well.This part involves a more complex hint, such as an anagram, homophone, hidden word, etc.
Sadly, We don't have an explanation for this specific crossword clue yet.